Banner

Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs391098 chr16:16356666 T/C NOMO2 chr16:18511182-18573533:- -0.49 -7.4 6.26E-13 Box Plot
THCA rs3912503 chr11:49281916 C/T FOLH1B chr11:89372395-89431886:+ 0.35 6.06 2.82E-9 Box Plot
THCA rs3913623 chr3:125689821 A/G ROPN1 chr3:123687368-123711025:- -0.33 -5.9 6.7E-9 Box Plot
THCA rs3915352 chr7:33138472 C/T FKBP9L chr7:55748767-55780945:- 0.38 6.86 2.19E-11 Box Plot
THCA rs3924476 chr11:48581733 T/C FOLH1B chr11:89372395-89431886:+ 0.42 6.22 1.09E-9 Box Plot
THCA rs393317 chr21:18938260 T/G CXADRP3 chr18:14477954-14499277:- 0.33 6.19 1.27E-9 Box Plot
THCA rs3933439 chr17:15657451 A/G ZNF286B chr17:18561742-18585575:- 0.39 8.16 2.97E-15 Box Plot
THCA rs3949218 chr1:246384914 C/T RAD23A chr19:13056669-13064456:+ -0.36 -6.03 3.27E-9 Box Plot
THCA rs3950451 chr5:49668951 A/C LOC647121 chr1:121260910-121313686:+ 0.37 7.79 4.17E-14 Box Plot
THCA rs3961916 chr2:113292394 C/G RGPD5 chr2:110550335-110615272:+ 0.5 7.13 3.63E-12 Box Plot
THCA rs3961919 chr2:113243321 A/G RGPD5 chr2:110550335-110615272:+ 0.33 6.66 7.38E-11 Box Plot
THCA rs3964873 chr10:51822906 C/T FAM21B chr10:47894023-47949412:+ -0.53 -7.25 1.64E-12 Box Plot
THCA rs3964886 chr10:51819952 G/A FAM21B chr10:47894023-47949412:+ 0.58 7.62 1.38E-13 Box Plot
THCA rs3966994 chr17:15658895 A/T ZNF286B chr17:18561742-18585575:- -0.37 -7.97 1.16E-14 Box Plot
THCA rs3969150 chr2:132204464 G/C CCDC74B chr2:130896860-130902707:- 0.35 6.14 1.74E-9 Box Plot